Stone volume is the trench, before the pipe displaces any of it.
A 50 foot trench, 12 inches wide and 24 inches deep, is 50 times 1 times 2, divided by 27, or 3.70 cubic yards. The pipe length is the 50 feet you typed. The drainage calculator example, a 0.40 coefficient, 2 inches per hour, and 0.50 acres, is 0.400 cubic feet per second, about 179.5 gallons per minute. The rational method is Q = C × i × A, with A in acres and i in inches per hour. It is a peak-flow sketch. It does not route a pipe network or check a percolation rate.